Commandline Utilities ===================== Updating Your Local Cache ------------------------- .. program-output:: civicpy update -h Creating a VCF of CIViC Variants -------------------------------- .. program-output:: civicpy create-vcf -h Annotating a VCF with data from CIViC Variants ---------------------------------------------- .. program-output:: civicpy annotate-vcf -h Creating a GKS JSON file to submit to ClinVar --------------------------------------------- .. program-output:: civicpy create-gks-json -h